Rethinking Data Augmentation for Single-source Domain Generalization in OCT Image Segmentation

  • Jiayi Lu
  • , Shaodong Ma*
  • , YONGHUAI LIU
  • , Yuhui Ma
  • , Lei Mou
  • , Yang Jiang*
  • , Yitian Zhao*
  • *Corresponding author for this work

Research output: Contribution to journalArticle (journal)peer-review

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Abstract

Domain shifts between samples acquired with different instruments are one of the major challenges in accurate segmentation of Optical Coherence Tomography (OCT) images. Given that OCT images may be acquired with different devices in different clinical centers, this study presents astyle and structure data augmentation (SSDA) method to improve the adaptability of segmentation models. Inspired by our initial analysis of OCT domain differences, we propose an innovative hypothesis that domain
shifts are primarily due to differences in image style and anatomical structure, which further guides the design of
our method. By designing a modality-specific NURBS curve for style enhancement and implementing global and local
elastic deformation fields, SSDA addresses both stylistic and structural variations in OCT data. Global deformations
simulate changes in retinal curvature, while local deformations model layer-specific changes observed in OCT
images. We validate our hypothesis through a comprehensive evaluation conducted on five OCT data domains,
each differing in device type and imaging conditions. We train models on each of these domains for single-domain
generalisation experiments and evaluate performance on the remaining unseen domains. The results show that SSDA outperforms existing methods when segmenting OCT images from different sources with different requirements for retinal layer segmentation. Specifically, across five different source domain generalisation experiments, SSDA achieves approximately 1.6% higher Dice and 2.6% improved MIOU, underscoring its superior segmentation accuracy and robust
generalisation across all evaluated unseen domains. The source code can be found at: https://github.com/iMEDLab/
SSDA-OCTSeg.
Original languageEnglish
Pages (from-to)5642-5655
Number of pages14
JournalIEEE Journal of Biomedical and Health Informatics
Volume29
Issue number8
Early online date18 Feb 2025
DOIs
Publication statusPublished - 8 Aug 2025

Keywords

  • OCT Layer Segmentation
  • Domain Generalization
  • Data Augmentation
  • Domain Shifts
  • data augmentation
  • domain generalization
  • domain shifts
  • OCT layer segmentation

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