Abstract
Domain shifts between samples acquired with different instruments are one of the major challenges in accurate segmentation of Optical Coherence Tomography (OCT) images. Given that OCT images may be acquired with different devices in different clinical centers, this study presents astyle and structure data augmentation (SSDA) method to improve the adaptability of segmentation models. Inspired by our initial analysis of OCT domain differences, we propose an innovative hypothesis that domain
shifts are primarily due to differences in image style and anatomical structure, which further guides the design of
our method. By designing a modality-specific NURBS curve for style enhancement and implementing global and local
elastic deformation fields, SSDA addresses both stylistic and structural variations in OCT data. Global deformations
simulate changes in retinal curvature, while local deformations model layer-specific changes observed in OCT
images. We validate our hypothesis through a comprehensive evaluation conducted on five OCT data domains,
each differing in device type and imaging conditions. We train models on each of these domains for single-domain
generalisation experiments and evaluate performance on the remaining unseen domains. The results show that SSDA outperforms existing methods when segmenting OCT images from different sources with different requirements for retinal layer segmentation. Specifically, across five different source domain generalisation experiments, SSDA achieves approximately 1.6% higher Dice and 2.6% improved MIOU, underscoring its superior segmentation accuracy and robust
generalisation across all evaluated unseen domains. The source code can be found at: https://github.com/iMEDLab/
SSDA-OCTSeg.
shifts are primarily due to differences in image style and anatomical structure, which further guides the design of
our method. By designing a modality-specific NURBS curve for style enhancement and implementing global and local
elastic deformation fields, SSDA addresses both stylistic and structural variations in OCT data. Global deformations
simulate changes in retinal curvature, while local deformations model layer-specific changes observed in OCT
images. We validate our hypothesis through a comprehensive evaluation conducted on five OCT data domains,
each differing in device type and imaging conditions. We train models on each of these domains for single-domain
generalisation experiments and evaluate performance on the remaining unseen domains. The results show that SSDA outperforms existing methods when segmenting OCT images from different sources with different requirements for retinal layer segmentation. Specifically, across five different source domain generalisation experiments, SSDA achieves approximately 1.6% higher Dice and 2.6% improved MIOU, underscoring its superior segmentation accuracy and robust
generalisation across all evaluated unseen domains. The source code can be found at: https://github.com/iMEDLab/
SSDA-OCTSeg.
| Original language | English |
|---|---|
| Pages (from-to) | 5642-5655 |
| Number of pages | 14 |
| Journal | IEEE Journal of Biomedical and Health Informatics |
| Volume | 29 |
| Issue number | 8 |
| Early online date | 18 Feb 2025 |
| DOIs | |
| Publication status | Published - 8 Aug 2025 |
Keywords
- OCT Layer Segmentation
- Domain Generalization
- Data Augmentation
- Domain Shifts
- data augmentation
- domain generalization
- domain shifts
- OCT layer segmentation