TY - GEN
T1 - Enhancing Polyp Segmentation Generalizability by Minimizing Images' Total Variation
AU - Haithami, Mahmood
AU - Ahmed, Amr
AU - Liao, Iman Yi
AU - Jalab, Hamid
N1 - Publisher Copyright:
© 2023 IEEE.
PY - 2023/9/1
Y1 - 2023/9/1
N2 - Polyps are considered a precursor of colon cancer and early detection of polyps may help decrease mortality rate. Several deep learning models have been proposed to address the problem, however, with limited generalizability due to the scarcity of the current public datasets. To tackle the issue, researchers typically use data augmentation techniques or generative models to inflate training images, independent of a downstream learning task. In this paper, we propose a deep learning framework to jointly train an image transformation model with a segmentation model where the output of the former is the input of the latter. During training, the image transformation model generates variations of the input image at every epoch, implicitly increasing the training data size for the segmentation model. On the other hand, we design a total variational denoising cost for the image transformation model, which effectively ensures that a transformation applied to an input image works towards the segmentation and not any other random effects which may hurt the segmentation goal. The experimental results with different settings demonstrate that the proposed framework has consistently shown an improvement of approximately 1% to 10% polyp IoU on unseen test images.
AB - Polyps are considered a precursor of colon cancer and early detection of polyps may help decrease mortality rate. Several deep learning models have been proposed to address the problem, however, with limited generalizability due to the scarcity of the current public datasets. To tackle the issue, researchers typically use data augmentation techniques or generative models to inflate training images, independent of a downstream learning task. In this paper, we propose a deep learning framework to jointly train an image transformation model with a segmentation model where the output of the former is the input of the latter. During training, the image transformation model generates variations of the input image at every epoch, implicitly increasing the training data size for the segmentation model. On the other hand, we design a total variational denoising cost for the image transformation model, which effectively ensures that a transformation applied to an input image works towards the segmentation and not any other random effects which may hurt the segmentation goal. The experimental results with different settings demonstrate that the proposed framework has consistently shown an improvement of approximately 1% to 10% polyp IoU on unseen test images.
KW - generalizability
KW - image transformation
KW - Polyp
KW - segmentation
KW - total variation
UR - http://www.scopus.com/inward/record.url?scp=85172108386&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85172108386&partnerID=8YFLogxK
U2 - 10.1109/ISBI53787.2023.10230421
DO - 10.1109/ISBI53787.2023.10230421
M3 - Conference proceeding (ISBN)
AN - SCOPUS:85172108386
SN - 9781665473583
T3 - Proceedings - International Symposium on Biomedical Imaging
SP - 1
EP - 5
BT - 2023 IEEE International Symposium on Biomedical Imaging, ISBI 2023
PB - IEEE Computer Society
T2 - 20th IEEE International Symposium on Biomedical Imaging, ISBI 2023
Y2 - 18 April 2023 through 21 April 2023
ER -